Yan Zhou, Lynn Heidenreich, Tony Prato,
Christopher Fulcher, Steven Vance, and Christopher Barnett
ABSTRACT: Concerns about the impacts of farming on
water quality prompted the establishment of the
President's Initiative on Enhancing Water Quality in
1989. To address these concerns the USDA selected
Management Systems Evaluation Areas (MSEAs) in five mid
western states. Goodwater Creek watershed, located in
an agricultural region of north central Missouri, is
one such site. The watershed is dominated by claypan
soils and has a significant potential for soil erosion
and surface and ground water contamination. The study
seeks to identify the areas within the watershed that
currently exceed water quality standards with respect
to sediment, nutrients and pesticides, and to evaluate
the environmental consequences of the five alternative
MSEA farming systems using the SWAT (Soil and Water
Assessment Tool) model. The watershed is subdivided
into 58 natural subbasins, which are further subdivided
into 259 subbasins based on land uses or crop types.
The model simulates at both watershed and subbasin
levels. ArcInfo GIS is being used to develop the
necessary input parameters for water quality modeling
and to evaluate water quality results at the farm and
watershed scales. The GIS database consists of
topography, hydrology, soils, land use and farm
cropping histories. This project shows that integration
of SWAT with ArcInfo is an effective approach to the
basin scale water quality modeling.
INTRODUCTION
Concerns about the impacts of farming on water quality
prompted the establishment of the President’s Initiative on
Enhancing Water Quality in 1989. Five study sites were
selected by the United States Department of Agriculture (USDA)
to address the water quality concerns. These five study sites
are known as Management Systems Evaluation Areas (MSEAs). A
major objective of the MSEA project is to evaluate the impact
of alternative farming strategies on surface and ground water
quality and to promote best management practices that enhance
overall water quality.
Goodwater Creek watershed, the site of Missouri MSEA, is an
agricultural basin and has a significant potential for soil
erosion and surface and ground water contamination.
Pesticides, particularly atrazine, and nitrate from
fertilizers are the main potential water pollutants in the
area. Water samples collected from stream monitoring stations
and wells revealed that Atrazine concentrations in stream flow
from the Goodwater Creek watershed have ranged from less than
1 to over 100 ppb (parts per billion), and nitrate - N
concentration in ground water ranged from 0 to over 20 ppm
(parts per million) (Blanchard et al., 1993). The maximum
contaminant level (MCL) of atrazine set by the US
Environmental Protection Agency (EPA) is 3 ppb for drinking
water and the MCL of nitrate for drinking water is 10 ppm.
Although Goodwater Creek watershed is not a source of drinking
water, it feeds indirectly into the Mark Twain Reservoir,
which is drinking water source for communities in northeastern
Missouri.
Over the past years, a series of studies have been undertaken
by soil scientists, hydrologists and agricultural economists
to assess the effect of farming practices on water quality in
the Goodwater Creek watershed at the plot and farm field
scale. Water quality samples have been collected and analyzed
to represent the influence of current farming systems on
surface and ground water quality (Blanchard et al., 1993).
Alternative farming systems involving different combinations
of crop rotation, tillage methods and agricultural chemicals
have been evaluated on replicated research plots in terms of
economic and environmental effects and tradeoffs (Ma and
Prato, 1993; Prato et al., 1993).
The purpose of this study is to develop methods and data for
evaluating environmental consequences of alternative land
management practices at the watershed scale. In particular,
the Soil and Water Assessment Tool (SWAT) model is coupled
with a geographic information system (GIS) to evaluate surface
and ground water quality in the Goodwater Creek Watershed with
respect to sediment, nutrients and pesticide loads. SWAT
requires numerous input parameters, thereby requiring a
tremendous amount of time and expertise in the modeling
process. Using GIS, the parameter data can be generated and
updated effectively.
Specific objectives of the study include: 1) to utilize
ArcInfo GIS to compile, manage, analyze and display SWAT
input and output; 2) to evaluate the current water quality
status in Goodwater Creek watershed and to identify the areas
that exceed water quality MCLs; 3) to determine water quality
results of alternative management strategies at the watershed
scale; and 4) to compare the water quality results of current
and alternative farming systems and identify the best
management practices (BMPs) for the watershed.
STUDY AREA
Goodwater Creek watershed is located in Audrain County and
Boone County in north-central Missouri (Figure 1). The
watershed covers 28 square miles (72.5 square kilometers).
Agricultural lands occupy more than 78 percent of the
watershed. The predominant crops in the watershed include
corn, sorghum, wheat and soybeans. The dominant soil types are
Mexico silt loam, Mexico silty clay loam and Putnam silt loam.
The elevation ranges from 770 feet to 880 feet.
The MSEA alternative farming practices being evaluated in this
study are: 1) corn-soybean rotation, high agrichemical input,
minimum till; 2) sorghum-soybean rotation, medium agrichemical
input, minimum till; 3) corn-soybean-wheat rotation, low
agrichemical input, minimum till; 4) corn-soybean rotation,
high agrichemical input, no till; and 5) sorghum-soybean
rotation, high agrichemical input, minimum till.
THE SWAT MODEL
The Soil and Water Assessment Tool (SWAT) was developed by
USDA-ARS to predict the effect of alternative agricultural
management practices on water, sediment and chemical yields
from river basins. The model is physically based and operates
on a daily time step basis, and is capable of simulating long
periods of output for computing the effects of management
changes.
The SWAT model allows a watershed to be subdivided into
subbasins and simulates at the watershed and subbasin levels.
The SWAT input file structure consists of seven watershed and
nine subbasin input files. Watershed input files contain
general data bases and parameters about the watershed while
subbasin input files contain input data that are specific to
each subbasin.
The major output components of the SWAT model include surface
hydrology, weather, sedimentation, nutrients, pesticides,
groundwater and lateral flow, and crop yields. Sediment,
nutrient and pesticide yields are considered the primary
indicators of water quality. Calculation of sediment yield in
SWAT is based on the Modified Universal Soil Loss Equation
(MUSLE). Nutrient and pesticide yields are determined by soil
type, management practices, tillage operations and the amount
of fertilizer and pesticides applied, and are estimated in
surface runoff, lateral flow and percolation.
METHODS
SWAT requires numerous parameters to simulate for a continuous-
time and a large-scale basis. Thus the most critical component
of the modeling process is collection of required data to
drive the model. The data for most of these input parameters
can be directly extracted from a few GIS layers. Other
parameters need to be developed with manual assistance and
linkage to GIS spatial databases.
Basic GIS Layers
Four basic GIS layers are required to extract spatial input
for SWAT model. These layers are topography, hydrology, soils
and land use. For each of these layers, the processing
techniques used and the development of individual parameters
are discussed below. During the course of this project, these
procedures have been incorporated into a series of ARC Macro
Language (AML) programs to accomplish the tasks of continual
updating and rapid re-computation of the input parameters as
alternative scenarios develop. The Center for Agricultural for
Agricultural, Resources and Environmental Systems (CARES)
created some of these layers in another MSEA related study.
1. Topography
An elevation layer is used to develop the necessary
topographic inputs for the SWAT model. The layer was created
by digitizing contour lines off USGS 7.5 minute quadrangle
maps. The elevation coverage is used to generate a
hydrologically correct digital elevation model (DEM) of 1-acre
cell size with the TOPOGRID function. The TOPOGRID module is
facilitated with a drainage enforcement routine which clears
all spurious sinks not identified as known topographic
depressions. The flow direction of each grid cell is derived
from the DEM grid using the FLOWDIRECTION function and is used
as input to the WATERSHED function to determine subbasin
outlets and drainage contributing areas to the outlets. The
process results in the identification of 58 natural subbasins
in the watershed with an average area of 1.33 square
kilometers (Figure 2).
Conversion of the subbasin grid to a polygon coverage is
accomplished by using GRIDPOLY, which converts the grid layer
back into a coverage containing polygons with step-wise
boundaries. The subbasin polygon boundaries are then smoothed
to resemble natural drainage divides. Areal calculations for
each subbasin are generated automatically when the polygons
are created.
Computation of overland slope steepness for each subbasin
involves calculating slope percent rise for each cell in the
DEM grid via the SLOPE function and averaging the resulting
values within each subbasin. The subbasin id is used as the
common item for transferring slope data from the slope grid to
a subbasin polygon coverage.
2. Hydrology
A hydrographic layer containing the watershed stream network
is used to develop the channel input data. The stream network
is digitized from USGS 7.5 quadrangle maps. For stream
channels, the SWAT input data include channel length, channel
slope, channel top width, channel depth, Manning’s n values,
the hydraulic conductivity of the channel alluvium, and USLE K
factor. The data parameters are required for the main channel
and the longest channel in each subbasin. The main channel of
a subbasin is the one that flows from subbasin inlet to the
subbasin outlet while the longest channel is the stream
segment between the subbasin outlet and the most distant
point in the subbasin.
The main channels and the longest channels are selected out
respectively to create two new arc coverages. Stream lines in
each coverage are cut into segments with subbasin polygons and
encoded with respective subbasin ids. The length of channel is
calculated automatically for each subbasin when the channel
segments are formed. The elevation of the two end-nodes of
each stream segment is determined with elevation TIN
(triangulated irregular network) model and TINSPOT function.
The slope of channel is determined by dividing the channel
length with the elevation difference between the “starting”
and “ending” nodes.
Hydraulic conductivity and USLE K are supplied by county Soil
Conservation Services (SCS) soil reports. These parameters are
associated with soil types and are linked to the soil data
base. The channel coverages are overlaid with the soils layer
to determine the percentage length of each channel segment
fall in each soil polygon. A weighted average approach is then
used to compute hydraulic conductivity and USLE K factor for
the main and longest channels in each subbasin.
A flow path database of the main channels is developed by
determining the receiving subbasin for any given subbasin and
is used to construct the routing configuration for the
watershed. An AML program (FIG.AML) developed at CARES
accomplishes the constructing process. The program defines a
cursor pointing at the subbasin data base and links with the
channel flow path data to route and add flow through the
watershed. The routing algorithm of FIG.AML is based on a
study by Arnold et al. (1993).
3. Soils
The source for soils information is the SCS soils maps at
1:24,000 scale. The soils layer is overlain on the subbasin
layer to compute the dominant soil type for each subbasin.
Within each subbasin, soils are assumed uniformly distributed.
The resulting seven dominant soils include Mexico silt loam,
Mexico silty clay loam, Putnam silt loam, Adco silt loam,
Belknap silt loam, Leonard silty clay loam and Wilbur silt
loam.
4. Land Use
Land use data are based on interpretation of 1990-1991 aerial
photos and crop history data which describe actual crops
planted in a specific farm field in a given year. Four years
of crop record data from 1990 to 1993 were collected from
local ASCS offices. However, about 15 percent of the fields
lack any crop records. The prevailing land uses or crops in
the watershed include corn, soybeans, sorghum, wheat, hay,
pasture, forest, urban , water body and road.
The crop record data are converted into INFO tables and linked
to the land use spatial layer to generate four annual crop
history coverages. Average areal percentages of crops are
computed on the basis of four years of crop data to represent
current farming practices. These crop percentages are used to
further subdivide subbasins into sub-subbasins without spatial
positioning. In order to reduce the amount of computing time
and yet maintain reasonably accurate land management
information, two pre-processing steps are taken to adjust the
crop percentages. First, the adjustments are made in the use
of overall watershed crop percentage data for the subbasins
with more than 50 percent of no data crop lands. Second, any
land uses or crops occupying less than 7.0 percent of the
subbasin are dropped and the percentage areas are allocated to
the remaining categories on weighted basis. Thus the total
percentage of land uses or crops in each subbasin maintains
100 percent. As a result, land use categories are narrowed
down to include corn, soybeans, sorghum, wheat, hay, pasture,
forest and urban. Each subbasin contains 2 to 5 categories. A
total of 259 land use based subbasins are generated for the
Goodwater Creek watershed.
Other Parameters
1. Management Input Data
Management input files of current and alternative farming
strategies are compiled for land use categories including
corn, sorghum, soybeans, wheat, hay, pasture, forest and
urban. Each management file includes data for management
operations such as planting, harvest, tillage operations, and
pesticide and fertilizer application. Inputs include dates,
operation type code and application amounts. These input
parameters for the current farming practices are gathered
through various sources. The main sources include 1994
Missouri Farm Facts (1994), Grain Crop Pesticide Use in
Missouri (1992) and personal communications with MSEA project
researchers and university extension scientists who have
conducted field observations in the watershed for years. The
management input data of alternative farming systems are
mainly derived from the MSEA Management Plan (Kitchen, 1993).
By compiling detailed management files, the option of using
actual nutrient application is chosen over the automate
application option. Thus, management code input files (*.mco)
contain no data.
2. Soils Data
Soils input files are developed for the six dominant soil
types present in the watershed by using SWAT supported RUNSOIL
program. Two SWAT soils data bases SOILCAL.DAT and SOILCMZ.DAT
contain such information as bulk density, available water
capacity, saturated conductivity, particle size, organic
carbon and maximum rooting depth for thousands of soil types.
The RUNSOIL program extracts data from the soils data bases
and creates a soils input file for each soil type desired.
3. Soil Runoff Curve Number (CN)
Soil runoff curve number is the SCS antecedent moisture
condition II curve number and is used to estimate runoff
volume in model simulation. The SCS curve number varies from
place to place based on hydrological soil group, hydrologic
condition, management practice and landuse. Based on SCS soil
reports for Audrain and Boone counties, the majority of the
soils are classified as belonging to SCS hydrological soil
group D in “good” hydrologic condition. Thus CN values are
chosen from a SWAT data table based on the hydrologic soil
group and crop type.
4. Weather and Rainfall Data
Required weather and rainfall data include monthly average,
maximum and minimum temperatures, daily precipitation and
rainfall frequency in the study area. The weather input file
(*.wgn) is generated by running the model supported GETWEAT
program given the approximate latitude and longitude
coordinates of the Goodwater Creek watershed. The same weather
and rainfall conditions are assumed for each subbasin since
the Goodwater Creek watershed covers a relatively small area
of 28 square miles.
All climate adjustment factors are set to zero percent based
on the proximity of the Columbia, MO weather station used in
GETWEAT to the Goodwater Creek watershed. No climate
adjustment allows the use of actual simulated weather data
with regard to rainfall, temperature, radiation and humidity.
5. Channel Dimension Parameters and C factor
Stream channel parameters not directly extracted from the
hydrographic layer include channel’s roughness coefficient
(Manning’s n values), channel width and depth. One approach
would be to utilize GIS to estimate the channel dimension
based on hydrologic, land use and soils properties (Srinivasan
and Arnold, 1994). In this study, actual measurement data of
channel width and depth are available through other research
projects (Heidenreich, 1995). The channel dimension data
contain 43 measurements and vary very little throughout the
watershed. Therefore, an average value of the measurements is
used for all channels.
USLE cover factor C for stream channel is uniformly set to 0.5
for this study. The C factor value is allowed between the
range of 0 to 1, where C = 1 indicates no vegetation covering
the stream channel; and C = 0 indicates the channel is
completely protected so no degradation can occur. On observing
stream vegetation covering condition in the field, it is
considered that a medium stream C factor value 0.5
appropriately approximates the area.
6. Others
No pond input files (*.pnd), reservoir input files (*.res) and
lake water quality input files (*.lwq) are generated for the
study because no significant ponds, reservoir or lakes are
present in the watershed. The only water bodies in the
watershed are a few small agricultural ponds ranging from 0.05
acres to 13.3 acres.
The USLE erosion control practice factor P is associated with
land slope and slope length. Based on actual slope data in the
watershed and a P-factor table by Wischmeier and Smith (1978),
two P values are used for the area, namely P = 0.60 for
subbasins with 1 to 2 percent land slopes and P = 0.50 for
others.
Model Application
The current farming practices and five MSEA alternative
farming practices are being evaluated with the SWAT model.
Each model run uses a 20 year simulation. Because land use
management is the only target in this evaluation, all input
files except management files remain unchanged for each model
run.
EXPECTED RESULTS
The SWAT model is currently being refined to run alternative
land management scenarios, and the simulation outputs are
being interpreted and analyzed. SWAT generates voluminous
simulation results for hundreds of components. Each component
is reported in monthly and annual summaries for each subbasin
and the overall watershed over the 20-year time span. Water
quality results consist of sediment, nutrient and pesticide
yields. Outputs involving nutrient and pesticide yields are
far more numerous, including concentrations in surface runoff,
leaching, transport by sediment, and so on.
The interpretation of water quality results is expected to
include: 1) comparing average annual and monthly watershed
values of each water quality component among the different
land management practices, and 2) comparing and mapping
average monthly and annual subbasin outputs of each water
quality component for each farming system.
SUMMARY AND CONCLUSIONS
Agricultural practices generate potential pesticide and
nitrate contamination for the surface and ground water in the
Goodwater Creek watershed, Missouri. The SWAT model is used to
assess the impact of current and alternative farming practices
on water quality in the area. The modeling process involves
acquiring input data, running the model and analyzing the
results. ArcInfo is used to generate and update the input
parameters in an automated manner.
A GIS data base containing topography, hydrology, soils, and
land use and crop histories is created and used as basic
sources of input parameters for the SWAT modeling. In this
study the watershed is subdivided into 58 natural subbasins
based on the topography and hydrology in the area, and further
subdivided into 259 second level subbasins according to crop
percentages in each subbasin. SWAT simulates sediment,
pesticide and nutrient yields at the watershed and each
subbasin outlet. The simulations are being performed on
current and five alternative farming practices respectively.
The outputs allow for geographical and temporal examination
and comparison of water quality status within a single
management practice and across different farming systems.
ArcInfo proves to be an efficient tool in deriving the
information needed to run the SWAT model. Yet, the amount of
time and expertise required are still very much dependent on
the goals and scale set for a specific project. AMLs developed
through the course of this project have allowed rapid updating
of input files and large scale simulating of numerous
subbasins to become feasible. These AML programs can be used
in similar SWAT modeling studies and can be further integrated
into a graphic menu interface. Undoubtedly, future water
quality modeling studies will rely heavily on the use of
ArcInfo and the development of AMLS and menu interfaces.
ACKNOWLEDGMENTS
The research is conducted through a grant from The Center for
Agricultural and Rural Development (CARD), Iowa State
University. The writers are grateful to CARD. The writers also
wish to acknowledge Raghanvan Srinivasan, Jeff Arnold and
Nancy Sammons, USDA-ARS at Temple, TX, who have been providing
generous help on revising the SWAT model to meet the specific
needs of this project.
REFERENCES
Arnold, Jeff G., R. Srinivasan and B.A. Engel. 1993. Flexible
Watershed Configurations for Simulating Models. unpublished
report.
Blanchard, Paul E., Newell R. Kitchen, William W. Donald and
Lynn K. Heidenreich, 1993. Ground water transport of
agricultural chemicals at the Missouri MSEA. Proceedings of
3rd Annual Water Quality Conference, Feb. 4-5, 1993, Missouri
Agricultural Experiment Station, p93-99.
Heidenreich, Lynn K., 1995. Analysis of Alternative Atrazine
Policy Impacts on Surface Water Quality Using SWAT. Master
thesis in progress, University of Missouri at Columbia.
Integrated Pesticide Management Unit (IPM), 1993. Grain Crop
Pesticide Use in Missouri, 1992. Pesticide Impact Assessment
Program report, USDA ES 92-EPIX-1-0069, 6/1993.
Kitchen, Newell, 1993. The MSEA Management Plan. Unpublished
Report.
Ma, Jian and Tony Prato, 1993. Integrated Economics and
Environmental Evaluation of Missouri MSEA Farming Systems.
Proceedings of 3rd Annual Water Quality Conference, Feb. 4-5,
1993, Missouri Agricultural Experiment Station, p84-87.
Missouri Agricultural Statistics Service, 1994. 1994 Missouri
Farm Facts, A Complete Summary of Missouri’s Agricultural
Production, August 1994.
Prato, Tony, Feng Xu and Jian Ma, 1993. Costs and returns of
alternative systems in Missouri MSEA. Goodwater Creek
Watershed Farming Systems Water Quality Project, Presentations
given at the 1993 Field Day, August 19, p.11-11.
Srinivasan, R and J. G. Arnold, 1994. Integration of a basin-
scale water quality model with GIS, Water Resources Bulletin,
30(3), p.453-462.
Wischmeier, W.H. and D.D. Smith, 1978. Predicting rainfall
losses - A guide to conservation planning. USDA Agricultural
Handbook No. 537. Washington DC, 58p.
Yan Zhou, Research Associate
Lynn Heidenreich, Research Associate
Tony Prato, Professor and Director
Christopher Fulcher, Associate Director and Research Associate
Steven Vance, Research Associate
Christopher Barnett, Research Associate
Center for Agricultural, Resource and Environmental Systems (CARES)
200 Mumford Hall
University of Missouri
Columbia, Missouri 65211
Telephone: (314) 882-1644
Fax: (314) 882=3958